Summary of Correspondence Analysis
Phe UUU 0.70 ( 49) 1.38 (154) Ser UCU* 2.28 ( 84) 1.28 ( 79)
UUC* 1.30 ( 91) 0.62 ( 69) UCC* 2.01 ( 74) 0.65 ( 40)
Leu UUA 1.06 ( 50) 1.85 (147) UCA 0.52 ( 19) 1.25 ( 77)
UUG* 3.19 (150) 1.18 ( 94) UCG 0.41 ( 15) 0.68 ( 42)
CUU 0.45 ( 21) 0.94 ( 75) Pro CCU 1.00 ( 33) 1.52 ( 49)
CUC 0.09 ( 4) 0.62 ( 49) CCC 0.33 ( 11) 0.68 ( 22)
CUA 0.83 ( 39) 0.79 ( 63) CCA* 2.58 ( 85) 1.40 ( 45)
CUG 0.38 ( 18) 0.62 ( 49) CCG 0.09 ( 3) 0.40 ( 13)
Ile AUU 1.35 ( 87) 1.28 (157) Thr ACU 1.66 ( 64) 1.33 ( 79)
AUC* 1.59 (102) 0.52 ( 64) ACC* 1.51 ( 58) 0.64 ( 38)
AUA 0.06 ( 4) 1.19 (146) ACA 0.68 ( 26) 1.50 ( 89)
Met AUG 1.00 ( 56) 1.00 ( 89) ACG 0.16 ( 6) 0.54 ( 32)
Val GUU 1.75 (100) 1.45 ( 83) Ala GCU* 1.84 (137) 1.25 ( 56)
GUC* 1.57 ( 90) 0.59 ( 34) GCC* 1.56 (116) 0.60 ( 27)
GUA 0.14 ( 8) 1.24 ( 71) GCA 0.43 ( 32) 1.34 ( 60)
GUG 0.54 ( 31) 0.72 ( 41) GCG 0.17 ( 13) 0.80 ( 36)
Tyr UAU 0.42 ( 19) 1.24 ( 92) Cys UGU@ 1.59 ( 23) 1.06 ( 33)
UAC* 1.58 ( 71) 0.76 ( 56) UGC 0.41 ( 6) 0.94 ( 29)
TER UAA 1.88 ( 5) 0.75 ( 2) TER UGA 0.38 ( 1) 1.88 ( 5)
UAG 0.75 ( 2) 0.38 ( 1) Trp UGG 1.00 ( 29) 1.00 ( 50)
His CAU 0.69 ( 20) 1.43 ( 58) Arg CGU@ 1.05 ( 20) 0.58 ( 19)
CAC* 1.31 ( 38) 0.57 ( 23) CGC 0.11 ( 2) 0.52 ( 17)
Gln CAA* 1.69 ( 82) 1.37 ( 97) CGA 0.00 ( 0) 0.58 ( 19)
CAG 0.31 ( 15) 0.63 ( 45) CGG 0.00 ( 0) 0.55 ( 18)
Asn AAU 0.57 ( 35) 1.27 (199) Ser AGU 0.33 ( 12) 1.26 ( 78)
AAC* 1.43 ( 87) 0.73 (115) AGC 0.46 ( 17) 0.89 ( 55)
Lys AAA 0.66 ( 65) 1.28 (232) Arg AGA* 4.37 ( 83) 2.65 ( 87)
AAG* 1.34 (131) 0.72 (130) AGG 0.47 ( 9) 1.13 ( 37)
Asp GAU 0.89 ( 77) 1.45 (173) Gly GGU* 3.30 (171) 1.18 ( 47)
GAC* 1.11 ( 97) 0.55 ( 66) GGC 0.37 ( 19) 0.95 ( 38)
Glu GAA* 1.62 (160) 1.40 (218) GGA 0.15 ( 8) 1.27 ( 51)
GAG 0.38 ( 38) 0.60 ( 94) GGG 0.17 ( 9) 0.60 ( 24)
Number of codons in high bias dataset 3027
Number of codons in low bias dataset 4377
Note: high bias was assigned to the dataset with the lower average Nc
Codon UCU (Ser) chi value was 19.394
Codon UGU (Cys) chi value was 5.680
Codon UUC (Phe) chi value was 40.473
Codon UCC (Ser) chi value was 45.909
Codon UAC (Tyr) chi value was 37.897
Codon UUG (Leu) chi value was 91.099
Codon CGU (Arg) chi value was 4.108
Codon CAC (His) chi value was 18.913
Codon CCA (Pro) chi value was 22.727
Codon CAA (Gln) chi value was 8.070
Codon AUC (Ile) chi value was 76.047
Codon ACC (Thr) chi value was 23.800
Codon AAC (Asn) chi value was 42.516
Codon AGA (Arg) chi value was 23.908
Codon AAG (Lys) chi value was 48.846
Codon GCU (Ala) chi value was 10.015
Codon GGU (Gly) chi value was 106.044
Codon GUC (Val) chi value was 34.680
Codon GCC (Ala) chi value was 30.283
Codon GAC (Asp) chi value was 33.356
Codon GAA (Glu) chi value was 7.552